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Cluster: HRGMv2_4242_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4242_46 HRGMv2_4242_46_1 1 1593 - GH13_4
CAZyme HRGMv2_4242_46 HRGMv2_4242_46_2 1590 2921 - GH32
TC HRGMv2_4242_46 HRGMv2_4242_46_3 2955 3794 - 3.A.1.1.45
TC HRGMv2_4242_46 HRGMv2_4242_46_4 3794 4666 - 3.A.1.1.45
TC HRGMv2_4242_46 HRGMv2_4242_46_5 4689 6065 - 3.A.1.1.45
Gene ID: HRGMv2_4242_46_1
Type: CAZyme
Location: 1 - 1593 (-)
Gene ID: HRGMv2_4242_46_2
Type: CAZyme
Location: 1590 - 2921 (-)
Gene ID: HRGMv2_4242_46_3
Type: TC
Location: 2955 - 3794 (-)
Gene ID: HRGMv2_4242_46_4
Type: TC
Location: 3794 - 4666 (-)
Gene ID: HRGMv2_4242_46_5
Type: TC
Location: 4689 - 6065 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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