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Cluster: HRGMv2_4242_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4242_43 HRGMv2_4242_43_7 6061 7758 - 8.A.59.2.1
CAZyme HRGMv2_4242_43 HRGMv2_4242_43_8 7866 10982 - GH38
CAZyme HRGMv2_4242_43 HRGMv2_4242_43_9 11109 12389 - GH125
sulfatase HRGMv2_4242_43 HRGMv2_4242_43_10 12509 13852 - S1_71
sulfatase HRGMv2_4242_43 HRGMv2_4242_43_11 13870 15339 - S1_64
TC HRGMv2_4242_43 HRGMv2_4242_43_12 15314 16363 - 3.A.1.5.29
TC HRGMv2_4242_43 HRGMv2_4242_43_13 16360 17337 - 3.A.1.5.15
TC HRGMv2_4242_43 HRGMv2_4242_43_14 17365 18243 - 3.A.1.5.6
TC HRGMv2_4242_43 HRGMv2_4242_43_15 18260 19291 - 3.A.1.5.16
TC HRGMv2_4242_43 HRGMv2_4242_43_16 19337 20998 - 3.A.1.5.16
TF HRGMv2_4242_43 HRGMv2_4242_43_17 21168 21902 + HTH_AraC | HTH_AraC
TC HRGMv2_4242_43 HRGMv2_4242_43_18 21920 23659 + 8.A.59.2.1
Gene ID: HRGMv2_4242_43_7
Type: TC
Location: 6061 - 7758 (-)
Gene ID: HRGMv2_4242_43_8
Type: CAZyme
Location: 7866 - 10982 (-)
Gene ID: HRGMv2_4242_43_9
Type: CAZyme
Location: 11109 - 12389 (-)
Gene ID: HRGMv2_4242_43_10
Type: sulfatase
Location: 12509 - 13852 (-)
Gene ID: HRGMv2_4242_43_11
Type: sulfatase
Location: 13870 - 15339 (-)
Gene ID: HRGMv2_4242_43_12
Type: TC
Location: 15314 - 16363 (-)
Gene ID: HRGMv2_4242_43_13
Type: TC
Location: 16360 - 17337 (-)
Gene ID: HRGMv2_4242_43_14
Type: TC
Location: 17365 - 18243 (-)
Gene ID: HRGMv2_4242_43_15
Type: TC
Location: 18260 - 19291 (-)
Gene ID: HRGMv2_4242_43_16
Type: TC
Location: 19337 - 20998 (-)
Gene ID: HRGMv2_4242_43_17
Type: TF
Location: 21168 - 21902 (+)
Gene ID: HRGMv2_4242_43_18
Type: TC
Location: 21920 - 23659 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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