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Cluster: HRGMv2_4242_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4242_30 HRGMv2_4242_30_9 9312 10724 + 2.A.21.3.6
pfam HRGMv2_4242_30 HRGMv2_4242_30_10 10784 11824 - ApbE
CAZyme HRGMv2_4242_30 HRGMv2_4242_30_11 11931 12599 + CE4
STP HRGMv2_4242_30 HRGMv2_4242_30_12 12609 13946 + AAA
TC HRGMv2_4242_30 HRGMv2_4242_30_13 13943 15301 + 2.A.66.1.32
STP HRGMv2_4242_30 HRGMv2_4242_30_14 15287 15793 - SKI
TF HRGMv2_4242_30 HRGMv2_4242_30_15 16002 16469 + MarR
TC HRGMv2_4242_30 HRGMv2_4242_30_16 16462 18630 + 3.A.1.135.6
TC HRGMv2_4242_30 HRGMv2_4242_30_17 18623 20458 + 3.A.1.135.6
Gene ID: HRGMv2_4242_30_9
Type: TC
Location: 9312 - 10724 (+)
Gene ID: HRGMv2_4242_30_10
Type: pfam
Location: 10784 - 11824 (-)
Gene ID: HRGMv2_4242_30_11
Type: CAZyme
Location: 11931 - 12599 (+)
Gene ID: HRGMv2_4242_30_12
Type: STP
Location: 12609 - 13946 (+)
Gene ID: HRGMv2_4242_30_13
Type: TC
Location: 13943 - 15301 (+)
Gene ID: HRGMv2_4242_30_14
Type: STP
Location: 15287 - 15793 (-)
Gene ID: HRGMv2_4242_30_15
Type: TF
Location: 16002 - 16469 (+)
Gene ID: HRGMv2_4242_30_16
Type: TC
Location: 16462 - 18630 (+)
Gene ID: HRGMv2_4242_30_17
Type: TC
Location: 18623 - 20458 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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