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Cluster: HRGMv2_4242_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4242_28 HRGMv2_4242_28_19 22455 24806 + 2.A.56.1.1
TC HRGMv2_4242_28 HRGMv2_4242_28_20 25010 26320 - 2.A.40.2.1
CAZyme HRGMv2_4242_28 HRGMv2_4242_28_21 26480 28612 + GH13_11
TC HRGMv2_4242_28 HRGMv2_4242_28_22 28688 29305 - 2.A.115.2.14
pfam HRGMv2_4242_28 HRGMv2_4242_28_23 29506 31023 + LytR_cpsA_psr
TC HRGMv2_4242_28 HRGMv2_4242_28_24 31386 32990 + 2.A.35.2.1
TC HRGMv2_4242_28 HRGMv2_4242_28_25 33099 34475 - 2.A.66.1.26
Gene ID: HRGMv2_4242_28_19
Type: TC
Location: 22455 - 24806 (+)
Gene ID: HRGMv2_4242_28_20
Type: TC
Location: 25010 - 26320 (-)
Gene ID: HRGMv2_4242_28_21
Type: CAZyme
Location: 26480 - 28612 (+)
Gene ID: HRGMv2_4242_28_22
Type: TC
Location: 28688 - 29305 (-)
Gene ID: HRGMv2_4242_28_23
Type: pfam
Location: 29506 - 31023 (+)
Gene ID: HRGMv2_4242_28_24
Type: TC
Location: 31386 - 32990 (+)
Gene ID: HRGMv2_4242_28_25
Type: TC
Location: 33099 - 34475 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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