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Cluster: HRGMv2_4242_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4242_11 HRGMv2_4242_11_53 65594 67537 + GH127
pfam HRGMv2_4242_11 HRGMv2_4242_11_54 67672 68886 - DHHW | ALGX
TC HRGMv2_4242_11 HRGMv2_4242_11_55 68906 70318 - 2.A.50.2.1
pfam HRGMv2_4242_11 HRGMv2_4242_11_56 70357 70839 - DUF4358
pfam HRGMv2_4242_11 HRGMv2_4242_11_57 70832 71653 - Lipase_GDSL | Lipase_GDSL_2
TC HRGMv2_4242_11 HRGMv2_4242_11_58 71894 72781 + 2.A.66.1.28
Gene ID: HRGMv2_4242_11_53
Type: CAZyme
Location: 65594 - 67537 (+)
Gene ID: HRGMv2_4242_11_54
Type: pfam
Location: 67672 - 68886 (-)
Gene ID: HRGMv2_4242_11_55
Type: TC
Location: 68906 - 70318 (-)
Gene ID: HRGMv2_4242_11_56
Type: pfam
Location: 70357 - 70839 (-)
Gene ID: HRGMv2_4242_11_57
Type: pfam
Location: 70832 - 71653 (-)
Gene ID: HRGMv2_4242_11_58
Type: TC
Location: 71894 - 72781 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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