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Cluster: HRGMv2_4242_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4242_11 HRGMv2_4242_11_45 54954 56774 - 8.A.59.2.1
STP HRGMv2_4242_11 HRGMv2_4242_11_46 56957 58243 + SBP_bac_1
TC HRGMv2_4242_11 HRGMv2_4242_11_47 58328 59206 + 3.A.1.1.41
TC HRGMv2_4242_11 HRGMv2_4242_11_48 59220 60074 + 3.A.1.1.17
CAZyme HRGMv2_4242_11 HRGMv2_4242_11_49 60111 61223 + GH172
Gene ID: HRGMv2_4242_11_45
Type: TC
Location: 54954 - 56774 (-)
Gene ID: HRGMv2_4242_11_46
Type: STP
Location: 56957 - 58243 (+)
Gene ID: HRGMv2_4242_11_47
Type: TC
Location: 58328 - 59206 (+)
Gene ID: HRGMv2_4242_11_48
Type: TC
Location: 59220 - 60074 (+)
Gene ID: HRGMv2_4242_11_49
Type: CAZyme
Location: 60111 - 61223 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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