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Cluster: HRGMv2_4242_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4242_10 HRGMv2_4242_10_50 44989 46938 + 3.A.1.5.1
TC HRGMv2_4242_10 HRGMv2_4242_10_51 46938 47888 + 3.A.1.5.2
TC HRGMv2_4242_10 HRGMv2_4242_10_52 47888 48811 + 3.A.1.5.19
TC HRGMv2_4242_10 HRGMv2_4242_10_53 48828 49868 + 3.A.1.5.25
TC HRGMv2_4242_10 HRGMv2_4242_10_54 49877 50806 + 3.A.1.5.19
NULL(UNKNOWN) HRGMv2_4242_10 HRGMv2_4242_10_55 50883 51305 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4242_10 HRGMv2_4242_10_56 51457 53370 - GH20
TC HRGMv2_4242_10 HRGMv2_4242_10_57 53393 54754 - 2.A.66.1.33
Gene ID: HRGMv2_4242_10_50
Type: TC
Location: 44989 - 46938 (+)
Gene ID: HRGMv2_4242_10_51
Type: TC
Location: 46938 - 47888 (+)
Gene ID: HRGMv2_4242_10_52
Type: TC
Location: 47888 - 48811 (+)
Gene ID: HRGMv2_4242_10_53
Type: TC
Location: 48828 - 49868 (+)
Gene ID: HRGMv2_4242_10_54
Type: TC
Location: 49877 - 50806 (+)
Gene ID: HRGMv2_4242_10_55
Type:
Location: 50883 - 51305 (+)
Gene ID: HRGMv2_4242_10_56
Type: CAZyme
Location: 51457 - 53370 (-)
Gene ID: HRGMv2_4242_10_57
Type: TC
Location: 53393 - 54754 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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