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Cluster: HRGMv2_4242_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4242_9 HRGMv2_4242_9_16 21878 23827 + GH133
CAZyme HRGMv2_4242_9 HRGMv2_4242_9_17 23845 26106 + GT35
CAZyme HRGMv2_4242_9 HRGMv2_4242_9_18 26129 27595 + GH77
peptidase HRGMv2_4242_9 HRGMv2_4242_9_19 27808 28803 + M15.UPB
TC HRGMv2_4242_9 HRGMv2_4242_9_20 28841 30601 + 3.A.1.135.5
TC HRGMv2_4242_9 HRGMv2_4242_9_21 30601 32505 + 3.A.1.135.5
peptidase HRGMv2_4242_9 HRGMv2_4242_9_22 32574 33800 - M20.003
TC HRGMv2_4242_9 HRGMv2_4242_9_23 33965 34336 + 1.E.14.1.17
TC HRGMv2_4242_9 HRGMv2_4242_9_24 34317 35009 + 2.A.122.1.4
TC HRGMv2_4242_9 HRGMv2_4242_9_25 35074 36951 - 9.A.8.1.5
STP HRGMv2_4242_9 HRGMv2_4242_9_26 36948 37235 - FeoA
CAZyme HRGMv2_4242_9 HRGMv2_4242_9_27 37327 38997 - GH13_31
TF HRGMv2_4242_9 HRGMv2_4242_9_28 39097 40017 - HTH_AraC | HTH_AraC
TC HRGMv2_4242_9 HRGMv2_4242_9_29 40030 40701 - 9.B.143.2.3
Gene ID: HRGMv2_4242_9_16
Type: CAZyme
Location: 21878 - 23827 (+)
Gene ID: HRGMv2_4242_9_17
Type: CAZyme
Location: 23845 - 26106 (+)
Gene ID: HRGMv2_4242_9_18
Type: CAZyme
Location: 26129 - 27595 (+)
Gene ID: HRGMv2_4242_9_19
Type: peptidase
Location: 27808 - 28803 (+)
Gene ID: HRGMv2_4242_9_20
Type: TC
Location: 28841 - 30601 (+)
Gene ID: HRGMv2_4242_9_21
Type: TC
Location: 30601 - 32505 (+)
Gene ID: HRGMv2_4242_9_22
Type: peptidase
Location: 32574 - 33800 (-)
Gene ID: HRGMv2_4242_9_23
Type: TC
Location: 33965 - 34336 (+)
Gene ID: HRGMv2_4242_9_24
Type: TC
Location: 34317 - 35009 (+)
Gene ID: HRGMv2_4242_9_25
Type: TC
Location: 35074 - 36951 (-)
Gene ID: HRGMv2_4242_9_26
Type: STP
Location: 36948 - 37235 (-)
Gene ID: HRGMv2_4242_9_27
Type: CAZyme
Location: 37327 - 38997 (-)
Gene ID: HRGMv2_4242_9_28
Type: TF
Location: 39097 - 40017 (-)
Gene ID: HRGMv2_4242_9_29
Type: TC
Location: 40030 - 40701 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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