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Cluster: HRGMv2_4242_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4242_1 HRGMv2_4242_1_60 67786 68859 + GH53
STP HRGMv2_4242_1 HRGMv2_4242_1_61 68875 70095 + SBP_bac_1
TC HRGMv2_4242_1 HRGMv2_4242_1_62 70100 71011 + 3.A.1.1.22
TC HRGMv2_4242_1 HRGMv2_4242_1_63 71013 71861 + 3.A.1.1.26
CAZyme HRGMv2_4242_1 HRGMv2_4242_1_64 71876 73891 + GH42
Gene ID: HRGMv2_4242_1_60
Type: CAZyme
Location: 67786 - 68859 (+)
Gene ID: HRGMv2_4242_1_61
Type: STP
Location: 68875 - 70095 (+)
Gene ID: HRGMv2_4242_1_62
Type: TC
Location: 70100 - 71011 (+)
Gene ID: HRGMv2_4242_1_63
Type: TC
Location: 71013 - 71861 (+)
Gene ID: HRGMv2_4242_1_64
Type: CAZyme
Location: 71876 - 73891 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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