dbCAN Logo

Cluster: HRGMv2_4241_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4241_5 HRGMv2_4241_5_14 12579 13430 + 2.A.66.1.33
pfam HRGMv2_4241_5 HRGMv2_4241_5_15 13427 13831 + MatE
pfam HRGMv2_4241_5 HRGMv2_4241_5_16 13923 14450 + Gate
CAZyme HRGMv2_4241_5 HRGMv2_4241_5_17 14459 16108 - GH123
CAZyme HRGMv2_4241_5 HRGMv2_4241_5_18 16202 17284 - GH172
TC HRGMv2_4241_5 HRGMv2_4241_5_19 17594 18940 - 2.A.66.1.33
pfam HRGMv2_4241_5 HRGMv2_4241_5_20 19062 20240 - Fe-ADH | Fe-ADH_2 | ADH_Fe_C
pfam HRGMv2_4241_5 HRGMv2_4241_5_21 20255 22123 - GT87
CAZyme HRGMv2_4241_5 HRGMv2_4241_5_22 22120 23163 - GT2
Gene ID: HRGMv2_4241_5_14
Type: TC
Location: 12579 - 13430 (+)
Gene ID: HRGMv2_4241_5_15
Type: pfam
Location: 13427 - 13831 (+)
Gene ID: HRGMv2_4241_5_16
Type: pfam
Location: 13923 - 14450 (+)
Gene ID: HRGMv2_4241_5_17
Type: CAZyme
Location: 14459 - 16108 (-)
Gene ID: HRGMv2_4241_5_18
Type: CAZyme
Location: 16202 - 17284 (-)
Gene ID: HRGMv2_4241_5_19
Type: TC
Location: 17594 - 18940 (-)
Gene ID: HRGMv2_4241_5_20
Type: pfam
Location: 19062 - 20240 (-)
Gene ID: HRGMv2_4241_5_21
Type: pfam
Location: 20255 - 22123 (-)
Gene ID: HRGMv2_4241_5_22
Type: CAZyme
Location: 22120 - 23163 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List