Cluster: HRGMv2_4241_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4241
- CGC Family ID: CGCFAM_10048
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4241_4 | HRGMv2_4241_4_24 | 23153 | 23824 | - | 3.A.1.135.9 |
| pfam | HRGMv2_4241_4 | HRGMv2_4241_4_25 | 24628 | 25254 | - | G3P_acyltransf |
| CAZyme | HRGMv2_4241_4 | HRGMv2_4241_4_26 | 25251 | 26384 | - | GT28 |
| pfam | HRGMv2_4241_4 | HRGMv2_4241_4_27 | 26557 | 27552 | - | Asparaginase | Asparaginase_C |
| pfam | HRGMv2_4241_4 | HRGMv2_4241_4_28 | 27572 | 28795 | - | ABC2_membrane_3 |
| TC | HRGMv2_4241_4 | HRGMv2_4241_4_29 | 28792 | 29709 | - | 3.A.1.132.4 |
Gene ID: HRGMv2_4241_4_24
Type: TC
Location: 23153 - 23824 (-)
Type: TC
Location: 23153 - 23824 (-)
Gene ID: HRGMv2_4241_4_25
Type: pfam
Location: 24628 - 25254 (-)
Type: pfam
Location: 24628 - 25254 (-)
Gene ID: HRGMv2_4241_4_26
Type: CAZyme
Location: 25251 - 26384 (-)
Type: CAZyme
Location: 25251 - 26384 (-)
Gene ID: HRGMv2_4241_4_27
Type: pfam
Location: 26557 - 27552 (-)
Type: pfam
Location: 26557 - 27552 (-)
Gene ID: HRGMv2_4241_4_28
Type: pfam
Location: 27572 - 28795 (-)
Type: pfam
Location: 27572 - 28795 (-)
Gene ID: HRGMv2_4241_4_29
Type: TC
Location: 28792 - 29709 (-)
Type: TC
Location: 28792 - 29709 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia sp002361775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.