Cluster: HRGMv2_4241_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4241
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4241_1 | HRGMv2_4241_1_50 | 59307 | 61139 | + | GT2 | GT2 |
| CAZyme | HRGMv2_4241_1 | HRGMv2_4241_1_51 | 61156 | 62121 | + | GT2 |
| TC | HRGMv2_4241_1 | HRGMv2_4241_1_52 | 62289 | 63695 | + | 9.B.18.1.1 |
| pfam | HRGMv2_4241_1 | HRGMv2_4241_1_53 | 63714 | 64874 | + | LytR_cpsA_psr |
| CAZyme | HRGMv2_4241_1 | HRGMv2_4241_1_54 | 64958 | 65881 | + | GT2 |
Gene ID: HRGMv2_4241_1_50
Type: CAZyme
Location: 59307 - 61139 (+)
Type: CAZyme
Location: 59307 - 61139 (+)
Gene ID: HRGMv2_4241_1_51
Type: CAZyme
Location: 61156 - 62121 (+)
Type: CAZyme
Location: 61156 - 62121 (+)
Gene ID: HRGMv2_4241_1_52
Type: TC
Location: 62289 - 63695 (+)
Type: TC
Location: 62289 - 63695 (+)
Gene ID: HRGMv2_4241_1_53
Type: pfam
Location: 63714 - 64874 (+)
Type: pfam
Location: 63714 - 64874 (+)
Gene ID: HRGMv2_4241_1_54
Type: CAZyme
Location: 64958 - 65881 (+)
Type: CAZyme
Location: 64958 - 65881 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia sp002361775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.