Cluster: HRGMv2_4241_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4241
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4241_1 | HRGMv2_4241_1_37 | 39438 | 40820 | + | 3.A.1.104.1 |
| TC | HRGMv2_4241_1 | HRGMv2_4241_1_38 | 40902 | 42227 | + | 3.A.1.103.6 |
| CAZyme | HRGMv2_4241_1 | HRGMv2_4241_1_39 | 42255 | 47894 | + | GT2 |
| CAZyme | HRGMv2_4241_1 | HRGMv2_4241_1_40 | 47870 | 50332 | + | GT2 | GT2 |
Gene ID: HRGMv2_4241_1_37
Type: TC
Location: 39438 - 40820 (+)
Type: TC
Location: 39438 - 40820 (+)
Gene ID: HRGMv2_4241_1_38
Type: TC
Location: 40902 - 42227 (+)
Type: TC
Location: 40902 - 42227 (+)
Gene ID: HRGMv2_4241_1_39
Type: CAZyme
Location: 42255 - 47894 (+)
Type: CAZyme
Location: 42255 - 47894 (+)
Gene ID: HRGMv2_4241_1_40
Type: CAZyme
Location: 47870 - 50332 (+)
Type: CAZyme
Location: 47870 - 50332 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia sp002361775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.