Cluster: HRGMv2_4241_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4241
- CGC Family ID: CGCFAM_01202
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4241_94 | HRGMv2_4241_94_1 | 75 | 1490 | - | GH1 |
| sulfatase | HRGMv2_4241_94 | HRGMv2_4241_94_2 | 1490 | 2425 | - | S1_7 |
| pfam | HRGMv2_4241_94 | HRGMv2_4241_94_3 | 2442 | 3359 | - | IU_nuc_hydro | Sde182_NH-like |
| TC | HRGMv2_4241_94 | HRGMv2_4241_94_4 | 3409 | 4791 | - | 2.A.2.3.3 |
Gene ID: HRGMv2_4241_94_1
Type: CAZyme
Location: 75 - 1490 (-)
Type: CAZyme
Location: 75 - 1490 (-)
Gene ID: HRGMv2_4241_94_2
Type: sulfatase
Location: 1490 - 2425 (-)
Type: sulfatase
Location: 1490 - 2425 (-)
Gene ID: HRGMv2_4241_94_3
Type: pfam
Location: 2442 - 3359 (-)
Type: pfam
Location: 2442 - 3359 (-)
Gene ID: HRGMv2_4241_94_4
Type: TC
Location: 3409 - 4791 (-)
Type: TC
Location: 3409 - 4791 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia sp002361775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.