Cluster: HRGMv2_4241_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4241
- CGC Family ID: CGCFAM_00153
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4241_91 | HRGMv2_4241_91_1 | 2 | 1798 | - | GH2 |
| CAZyme | HRGMv2_4241_91 | HRGMv2_4241_91_2 | 1814 | 3652 | - | GH20 |
| TC | HRGMv2_4241_91 | HRGMv2_4241_91_3 | 3789 | 4412 | - | 2.A.115.2.14 |
| TC | HRGMv2_4241_91 | HRGMv2_4241_91_4 | 4425 | 5135 | - | 3.A.1.4.10 |
| TC | HRGMv2_4241_91 | HRGMv2_4241_91_5 | 5147 | 5914 | - | 3.A.1.4.10 |
| TC | HRGMv2_4241_91 | HRGMv2_4241_91_6 | 5917 | 6960 | - | 3.A.1.4.8 |
Gene ID: HRGMv2_4241_91_1
Type: CAZyme
Location: 2 - 1798 (-)
Type: CAZyme
Location: 2 - 1798 (-)
Gene ID: HRGMv2_4241_91_2
Type: CAZyme
Location: 1814 - 3652 (-)
Type: CAZyme
Location: 1814 - 3652 (-)
Gene ID: HRGMv2_4241_91_3
Type: TC
Location: 3789 - 4412 (-)
Type: TC
Location: 3789 - 4412 (-)
Gene ID: HRGMv2_4241_91_4
Type: TC
Location: 4425 - 5135 (-)
Type: TC
Location: 4425 - 5135 (-)
Gene ID: HRGMv2_4241_91_5
Type: TC
Location: 5147 - 5914 (-)
Type: TC
Location: 5147 - 5914 (-)
Gene ID: HRGMv2_4241_91_6
Type: TC
Location: 5917 - 6960 (-)
Type: TC
Location: 5917 - 6960 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia sp002361775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.