Cluster: HRGMv2_4241_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4241
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4241_89 | HRGMv2_4241_89_1 | 2 | 274 | - | 3.A.1.1.46 |
| TC | HRGMv2_4241_89 | HRGMv2_4241_89_2 | 628 | 1401 | + | 9.B.28.1.2 |
| STP | HRGMv2_4241_89 | HRGMv2_4241_89_3 | 1444 | 3816 | - | HATPase_c | HisKA |
| TF | HRGMv2_4241_89 | HRGMv2_4241_89_4 | 3837 | 4532 | - | Trans_reg_C |
| CAZyme | HRGMv2_4241_89 | HRGMv2_4241_89_5 | 4665 | 6569 | - | GH42 | GH42 |
Gene ID: HRGMv2_4241_89_1
Type: TC
Location: 2 - 274 (-)
Type: TC
Location: 2 - 274 (-)
Gene ID: HRGMv2_4241_89_2
Type: TC
Location: 628 - 1401 (+)
Type: TC
Location: 628 - 1401 (+)
Gene ID: HRGMv2_4241_89_3
Type: STP
Location: 1444 - 3816 (-)
Type: STP
Location: 1444 - 3816 (-)
Gene ID: HRGMv2_4241_89_4
Type: TF
Location: 3837 - 4532 (-)
Type: TF
Location: 3837 - 4532 (-)
Gene ID: HRGMv2_4241_89_5
Type: CAZyme
Location: 4665 - 6569 (-)
Type: CAZyme
Location: 4665 - 6569 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia sp002361775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.