Cluster: HRGMv2_4241_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4241
- CGC Family ID: CGCFAM_00383
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4241_87 | HRGMv2_4241_87_2 | 225 | 1265 | + | 3.A.1.2.3 |
| NULL(UNKNOWN) | HRGMv2_4241_87 | HRGMv2_4241_87_3 | 1346 | 1921 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4241_87 | HRGMv2_4241_87_4 | 1923 | 3317 | + | 2.A.50.2.1 |
| pfam | HRGMv2_4241_87 | HRGMv2_4241_87_5 | 3370 | 4470 | + | DHHW |
| CAZyme | HRGMv2_4241_87 | HRGMv2_4241_87_6 | 4648 | 7605 | + | GH38 |
Gene ID: HRGMv2_4241_87_2
Type: TC
Location: 225 - 1265 (+)
Type: TC
Location: 225 - 1265 (+)
Gene ID: HRGMv2_4241_87_3
Type:
Location: 1346 - 1921 (+)
Type:
Location: 1346 - 1921 (+)
Gene ID: HRGMv2_4241_87_4
Type: TC
Location: 1923 - 3317 (+)
Type: TC
Location: 1923 - 3317 (+)
Gene ID: HRGMv2_4241_87_5
Type: pfam
Location: 3370 - 4470 (+)
Type: pfam
Location: 3370 - 4470 (+)
Gene ID: HRGMv2_4241_87_6
Type: CAZyme
Location: 4648 - 7605 (+)
Type: CAZyme
Location: 4648 - 7605 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia sp002361775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.