Cluster: HRGMv2_4241_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4241
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4241_1 | HRGMv2_4241_1_23 | 23034 | 23816 | + | 3.A.1.103.1 |
| TC | HRGMv2_4241_1 | HRGMv2_4241_1_24 | 23817 | 24548 | + | 3.A.1.103.4 |
| pfam | HRGMv2_4241_1 | HRGMv2_4241_1_25 | 24559 | 25803 | + | Glyphos_transf |
| CAZyme | HRGMv2_4241_1 | HRGMv2_4241_1_26 | 25815 | 26528 | + | GT2 |
Gene ID: HRGMv2_4241_1_23
Type: TC
Location: 23034 - 23816 (+)
Type: TC
Location: 23034 - 23816 (+)
Gene ID: HRGMv2_4241_1_24
Type: TC
Location: 23817 - 24548 (+)
Type: TC
Location: 23817 - 24548 (+)
Gene ID: HRGMv2_4241_1_25
Type: pfam
Location: 24559 - 25803 (+)
Type: pfam
Location: 24559 - 25803 (+)
Gene ID: HRGMv2_4241_1_26
Type: CAZyme
Location: 25815 - 26528 (+)
Type: CAZyme
Location: 25815 - 26528 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia sp002361775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.