Cluster: HRGMv2_4241_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4241
- CGC Family ID: CGCFAM_01867
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4241_15 | HRGMv2_4241_15_2 | 509 | 1807 | - | GH110 |
| CAZyme | HRGMv2_4241_15 | HRGMv2_4241_15_3 | 1826 | 3028 | - | GH109 |
| CAZyme | HRGMv2_4241_15 | HRGMv2_4241_15_4 | 3058 | 4401 | - | GH109 |
| TC | HRGMv2_4241_15 | HRGMv2_4241_15_5 | 4439 | 5359 | - | 3.A.1.1.10 |
| TC | HRGMv2_4241_15 | HRGMv2_4241_15_6 | 5384 | 6307 | - | 3.A.1.1.10 |
Gene ID: HRGMv2_4241_15_2
Type: CAZyme
Location: 509 - 1807 (-)
Type: CAZyme
Location: 509 - 1807 (-)
Gene ID: HRGMv2_4241_15_3
Type: CAZyme
Location: 1826 - 3028 (-)
Type: CAZyme
Location: 1826 - 3028 (-)
Gene ID: HRGMv2_4241_15_4
Type: CAZyme
Location: 3058 - 4401 (-)
Type: CAZyme
Location: 3058 - 4401 (-)
Gene ID: HRGMv2_4241_15_5
Type: TC
Location: 4439 - 5359 (-)
Type: TC
Location: 4439 - 5359 (-)
Gene ID: HRGMv2_4241_15_6
Type: TC
Location: 5384 - 6307 (-)
Type: TC
Location: 5384 - 6307 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia sp002361775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.