Cluster: HRGMv2_4241_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4241
- CGC Family ID: CGCFAM_01082
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4241_10 | HRGMv2_4241_10_28 | 31041 | 32414 | + | 2.A.66.1.32 |
| TC | HRGMv2_4241_10 | HRGMv2_4241_10_29 | 32511 | 33890 | - | 2.A.37.3.3 |
| CAZyme | HRGMv2_4241_10 | HRGMv2_4241_10_30 | 33944 | 35410 | - | GH77 |
| TC | HRGMv2_4241_10 | HRGMv2_4241_10_31 | 35561 | 37759 | - | 3.A.7.7.1 |
Gene ID: HRGMv2_4241_10_28
Type: TC
Location: 31041 - 32414 (+)
Type: TC
Location: 31041 - 32414 (+)
Gene ID: HRGMv2_4241_10_29
Type: TC
Location: 32511 - 33890 (-)
Type: TC
Location: 32511 - 33890 (-)
Gene ID: HRGMv2_4241_10_30
Type: CAZyme
Location: 33944 - 35410 (-)
Type: CAZyme
Location: 33944 - 35410 (-)
Gene ID: HRGMv2_4241_10_31
Type: TC
Location: 35561 - 37759 (-)
Type: TC
Location: 35561 - 37759 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia sp002361775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.