Cluster: HRGMv2_4235_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4235
- CGC Family ID: CGCFAM_00222
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4235_3 | HRGMv2_4235_3_92 | 106732 | 108306 | + | CBM50 |
| TC | HRGMv2_4235_3 | HRGMv2_4235_3_93 | 108662 | 109288 | + | 3.A.1.25.5 |
| TF | HRGMv2_4235_3 | HRGMv2_4235_3_94 | 109458 | 110135 | - | GntR |
| pfam | HRGMv2_4235_3 | HRGMv2_4235_3_95 | 110188 | 111084 | - | GHMP_kinases_N | GHMP_kinases_C |
| TC | HRGMv2_4235_3 | HRGMv2_4235_3_96 | 111258 | 112799 | + | 9.A.11.1.2 |
Gene ID: HRGMv2_4235_3_92
Type: CAZyme
Location: 106732 - 108306 (+)
Type: CAZyme
Location: 106732 - 108306 (+)
Gene ID: HRGMv2_4235_3_93
Type: TC
Location: 108662 - 109288 (+)
Type: TC
Location: 108662 - 109288 (+)
Gene ID: HRGMv2_4235_3_94
Type: TF
Location: 109458 - 110135 (-)
Type: TF
Location: 109458 - 110135 (-)
Gene ID: HRGMv2_4235_3_95
Type: pfam
Location: 110188 - 111084 (-)
Type: pfam
Location: 110188 - 111084 (-)
Gene ID: HRGMv2_4235_3_96
Type: TC
Location: 111258 - 112799 (+)
Type: TC
Location: 111258 - 112799 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Species
Anaerobutyricum stercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.