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Cluster: HRGMv2_4235_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4235_2 HRGMv2_4235_2_169 185153 185944 - 3.D.6.1.2
TC HRGMv2_4235_2 HRGMv2_4235_2_170 185960 186535 - 3.D.6.1.2
TC HRGMv2_4235_2 HRGMv2_4235_2_171 186550 187272 - 3.D.6.1.2
TC HRGMv2_4235_2 HRGMv2_4235_2_172 187275 187901 - 3.D.6.1.3
TC HRGMv2_4235_2 HRGMv2_4235_2_173 187901 188854 - 3.D.6.1.2
TC HRGMv2_4235_2 HRGMv2_4235_2_174 188873 190186 - 3.D.6.1.2
pfam HRGMv2_4235_2 HRGMv2_4235_2_175 190610 191017 - NusG_II
CAZyme HRGMv2_4235_2 HRGMv2_4235_2_176 190989 192011 - GT2
Gene ID: HRGMv2_4235_2_169
Type: TC
Location: 185153 - 185944 (-)
Gene ID: HRGMv2_4235_2_170
Type: TC
Location: 185960 - 186535 (-)
Gene ID: HRGMv2_4235_2_171
Type: TC
Location: 186550 - 187272 (-)
Gene ID: HRGMv2_4235_2_172
Type: TC
Location: 187275 - 187901 (-)
Gene ID: HRGMv2_4235_2_173
Type: TC
Location: 187901 - 188854 (-)
Gene ID: HRGMv2_4235_2_174
Type: TC
Location: 188873 - 190186 (-)
Gene ID: HRGMv2_4235_2_175
Type: pfam
Location: 190610 - 191017 (-)
Gene ID: HRGMv2_4235_2_176
Type: CAZyme
Location: 190989 - 192011 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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