dbCAN Logo

Cluster: HRGMv2_4235_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4235_1 HRGMv2_4235_1_281 268439 270328 + 3.D.1.4.2
TC HRGMv2_4235_1 HRGMv2_4235_1_282 270322 271185 + 3.D.1.4.2
TC HRGMv2_4235_1 HRGMv2_4235_1_283 271202 271648 + 3.D.1.4.2
TC HRGMv2_4235_1 HRGMv2_4235_1_284 271654 272001 + 3.D.1.4.2
TC HRGMv2_4235_1 HRGMv2_4235_1_285 272008 273087 + 3.D.1.4.2
STP HRGMv2_4235_1 HRGMv2_4235_1_286 273119 273502 + Fer4 | Fer4
STP HRGMv2_4235_1 HRGMv2_4235_1_287 273695 275683 + GGDEF | GGDEF
CAZyme HRGMv2_4235_1 HRGMv2_4235_1_288 275754 277883 + GH13_11
Gene ID: HRGMv2_4235_1_281
Type: TC
Location: 268439 - 270328 (+)
Gene ID: HRGMv2_4235_1_282
Type: TC
Location: 270322 - 271185 (+)
Gene ID: HRGMv2_4235_1_283
Type: TC
Location: 271202 - 271648 (+)
Gene ID: HRGMv2_4235_1_284
Type: TC
Location: 271654 - 272001 (+)
Gene ID: HRGMv2_4235_1_285
Type: TC
Location: 272008 - 273087 (+)
Gene ID: HRGMv2_4235_1_286
Type: STP
Location: 273119 - 273502 (+)
Gene ID: HRGMv2_4235_1_287
Type: STP
Location: 273695 - 275683 (+)
Gene ID: HRGMv2_4235_1_288
Type: CAZyme
Location: 275754 - 277883 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List