Cluster: HRGMv2_4235_CGC25
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4235
- CGC Family ID: CGCFAM_10566
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4235_26 | HRGMv2_4235_26_23 | 17967 | 19982 | - | GH120 |
| pfam | HRGMv2_4235_26 | HRGMv2_4235_26_24 | 20285 | 21277 | + | Transpeptidase |
| pfam | HRGMv2_4235_26 | HRGMv2_4235_26_25 | 21419 | 22336 | + | EamA | EamA | TPT |
| TC | HRGMv2_4235_26 | HRGMv2_4235_26_26 | 22376 | 23728 | - | 2.A.26.1.3 |
| TC | HRGMv2_4235_26 | HRGMv2_4235_26_27 | 23739 | 25094 | - | 2.A.40.7.6 |
| TC | HRGMv2_4235_26 | HRGMv2_4235_26_28 | 25266 | 26987 | - | 3.A.1.106.2 |
Gene ID: HRGMv2_4235_26_23
Type: CAZyme
Location: 17967 - 19982 (-)
Type: CAZyme
Location: 17967 - 19982 (-)
Gene ID: HRGMv2_4235_26_24
Type: pfam
Location: 20285 - 21277 (+)
Type: pfam
Location: 20285 - 21277 (+)
Gene ID: HRGMv2_4235_26_25
Type: pfam
Location: 21419 - 22336 (+)
Type: pfam
Location: 21419 - 22336 (+)
Gene ID: HRGMv2_4235_26_26
Type: TC
Location: 22376 - 23728 (-)
Type: TC
Location: 22376 - 23728 (-)
Gene ID: HRGMv2_4235_26_27
Type: TC
Location: 23739 - 25094 (-)
Type: TC
Location: 23739 - 25094 (-)
Gene ID: HRGMv2_4235_26_28
Type: TC
Location: 25266 - 26987 (-)
Type: TC
Location: 25266 - 26987 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Species
Anaerobutyricum stercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.