Cluster: HRGMv2_4235_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4235
- CGC Family ID: CGCFAM_02088
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4235_23 | HRGMv2_4235_23_36 | 39814 | 40464 | - | 1.C.113.1.3 |
| pfam | HRGMv2_4235_23 | HRGMv2_4235_23_37 | 40762 | 41595 | + | CN_hydrolase |
| TC | HRGMv2_4235_23 | HRGMv2_4235_23_38 | 41785 | 43371 | + | 3.A.18.1.1 |
| CAZyme | HRGMv2_4235_23 | HRGMv2_4235_23_39 | 43412 | 45520 | + | CBM34 | GH13_39 |
Gene ID: HRGMv2_4235_23_36
Type: TC
Location: 39814 - 40464 (-)
Type: TC
Location: 39814 - 40464 (-)
Gene ID: HRGMv2_4235_23_37
Type: pfam
Location: 40762 - 41595 (+)
Type: pfam
Location: 40762 - 41595 (+)
Gene ID: HRGMv2_4235_23_38
Type: TC
Location: 41785 - 43371 (+)
Type: TC
Location: 41785 - 43371 (+)
Gene ID: HRGMv2_4235_23_39
Type: CAZyme
Location: 43412 - 45520 (+)
Type: CAZyme
Location: 43412 - 45520 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Species
Anaerobutyricum stercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.