Cluster: HRGMv2_4235_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4235
- CGC Family ID: CGCFAM_00196
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4235_16 | HRGMv2_4235_16_54 | 66228 | 68117 | - | 3.A.1.135.5 |
| TC | HRGMv2_4235_16 | HRGMv2_4235_16_55 | 68110 | 69843 | - | 3.A.1.135.5 |
| TF | HRGMv2_4235_16 | HRGMv2_4235_16_56 | 69836 | 70324 | - | MarR |
| CAZyme | HRGMv2_4235_16 | HRGMv2_4235_16_57 | 70570 | 73854 | - | GH38 |
Gene ID: HRGMv2_4235_16_54
Type: TC
Location: 66228 - 68117 (-)
Type: TC
Location: 66228 - 68117 (-)
Gene ID: HRGMv2_4235_16_55
Type: TC
Location: 68110 - 69843 (-)
Type: TC
Location: 68110 - 69843 (-)
Gene ID: HRGMv2_4235_16_56
Type: TF
Location: 69836 - 70324 (-)
Type: TF
Location: 69836 - 70324 (-)
Gene ID: HRGMv2_4235_16_57
Type: CAZyme
Location: 70570 - 73854 (-)
Type: CAZyme
Location: 70570 - 73854 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Species
Anaerobutyricum stercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.