Cluster: HRGMv2_4235_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4235
- CGC Family ID: CGCFAM_00237
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4235_11 | HRGMv2_4235_11_25 | 23176 | 24843 | + | GH13_31 |
| TF | HRGMv2_4235_11 | HRGMv2_4235_11_26 | 24918 | 25457 | - | HTH_11 |
| pfam | HRGMv2_4235_11 | HRGMv2_4235_11_27 | 25560 | 26435 | - | QRPTase_C | QRPTase_N |
| TC | HRGMv2_4235_11 | HRGMv2_4235_11_28 | 26491 | 27681 | - | 3.D.10.1.4 |
Gene ID: HRGMv2_4235_11_25
Type: CAZyme
Location: 23176 - 24843 (+)
Type: CAZyme
Location: 23176 - 24843 (+)
Gene ID: HRGMv2_4235_11_26
Type: TF
Location: 24918 - 25457 (-)
Type: TF
Location: 24918 - 25457 (-)
Gene ID: HRGMv2_4235_11_27
Type: pfam
Location: 25560 - 26435 (-)
Type: pfam
Location: 25560 - 26435 (-)
Gene ID: HRGMv2_4235_11_28
Type: TC
Location: 26491 - 27681 (-)
Type: TC
Location: 26491 - 27681 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Species
Anaerobutyricum stercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.