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Cluster: HRGMv2_4235_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4235_10 HRGMv2_4235_10_75 79162 80013 - 3.A.1.1.20
TC HRGMv2_4235_10 HRGMv2_4235_10_76 80028 80876 - 3.A.1.1.20
STP HRGMv2_4235_10 HRGMv2_4235_10_77 80873 83137 - SBP_bac_1
TF HRGMv2_4235_10 HRGMv2_4235_10_78 83299 83967 + Trans_reg_C
TC HRGMv2_4235_10 HRGMv2_4235_10_79 84003 85322 + 2.A.21.9.2
CAZyme HRGMv2_4235_10 HRGMv2_4235_10_80 85340 86449 - GH172
TC HRGMv2_4235_10 HRGMv2_4235_10_81 86489 90055 - 3.A.1.122.2
Gene ID: HRGMv2_4235_10_75
Type: TC
Location: 79162 - 80013 (-)
Gene ID: HRGMv2_4235_10_76
Type: TC
Location: 80028 - 80876 (-)
Gene ID: HRGMv2_4235_10_77
Type: STP
Location: 80873 - 83137 (-)
Gene ID: HRGMv2_4235_10_78
Type: TF
Location: 83299 - 83967 (+)
Gene ID: HRGMv2_4235_10_79
Type: TC
Location: 84003 - 85322 (+)
Gene ID: HRGMv2_4235_10_80
Type: CAZyme
Location: 85340 - 86449 (-)
Gene ID: HRGMv2_4235_10_81
Type: TC
Location: 86489 - 90055 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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