Cluster: HRGMv2_4232_CGC9
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4232
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4232_2 | HRGMv2_4232_2_110 | 113918 | 115768 | + | 4.A.1.2.2 |
| CAZyme | HRGMv2_4232_2 | HRGMv2_4232_2_111 | 115781 | 117211 | + | GH1 |
| NULL(UNKNOWN) | HRGMv2_4232_2 | HRGMv2_4232_2_112 | 117359 | 117613 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4232_2 | HRGMv2_4232_2_113 | 117922 | 119133 | - | 3.A.1.122.2 |
| TC | HRGMv2_4232_2 | HRGMv2_4232_2_114 | 119130 | 119816 | - | 3.A.1.122.7 |
| NULL(UNKNOWN) | HRGMv2_4232_2 | HRGMv2_4232_2_115 | 119809 | 121113 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4232_2 | HRGMv2_4232_2_116 | 121387 | 123507 | + | GH31_1 |
| CAZyme | HRGMv2_4232_2 | HRGMv2_4232_2_117 | 123917 | 125713 | + | GH35 |
| TC | HRGMv2_4232_2 | HRGMv2_4232_2_118 | 126659 | 127663 | - | 2.A.98.1.4 |
| TF | HRGMv2_4232_2 | HRGMv2_4232_2_119 | 127772 | 128659 | + | HTH_1 |
| TC | HRGMv2_4232_2 | HRGMv2_4232_2_120 | 128886 | 131285 | + | 3.A.7.7.1 |
Gene ID: HRGMv2_4232_2_110
Type: TC
Location: 113918 - 115768 (+)
Type: TC
Location: 113918 - 115768 (+)
Gene ID: HRGMv2_4232_2_111
Type: CAZyme
Location: 115781 - 117211 (+)
Type: CAZyme
Location: 115781 - 117211 (+)
Gene ID: HRGMv2_4232_2_112
Type:
Location: 117359 - 117613 (-)
Type:
Location: 117359 - 117613 (-)
Gene ID: HRGMv2_4232_2_113
Type: TC
Location: 117922 - 119133 (-)
Type: TC
Location: 117922 - 119133 (-)
Gene ID: HRGMv2_4232_2_114
Type: TC
Location: 119130 - 119816 (-)
Type: TC
Location: 119130 - 119816 (-)
Gene ID: HRGMv2_4232_2_115
Type:
Location: 119809 - 121113 (-)
Type:
Location: 119809 - 121113 (-)
Gene ID: HRGMv2_4232_2_116
Type: CAZyme
Location: 121387 - 123507 (+)
Type: CAZyme
Location: 121387 - 123507 (+)
Gene ID: HRGMv2_4232_2_117
Type: CAZyme
Location: 123917 - 125713 (+)
Type: CAZyme
Location: 123917 - 125713 (+)
Gene ID: HRGMv2_4232_2_118
Type: TC
Location: 126659 - 127663 (-)
Type: TC
Location: 126659 - 127663 (-)
Gene ID: HRGMv2_4232_2_119
Type: TF
Location: 127772 - 128659 (+)
Type: TF
Location: 127772 - 128659 (+)
Gene ID: HRGMv2_4232_2_120
Type: TC
Location: 128886 - 131285 (+)
Type: TC
Location: 128886 - 131285 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
MOL361
Family
Turicibacteraceae
Genus
Turicibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.