Cluster: HRGMv2_4232_CGC41
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4232
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4232_50 | HRGMv2_4232_50_2 | 1363 | 2469 | + | 3.A.18.1.1 |
| TC | HRGMv2_4232_50 | HRGMv2_4232_50_3 | 2507 | 3070 | - | 2.A.51.1.6 |
| pfam | HRGMv2_4232_50 | HRGMv2_4232_50_4 | 3067 | 3642 | - | Chromate_transp |
| TF | HRGMv2_4232_50 | HRGMv2_4232_50_5 | 3775 | 4644 | + | HTH_1 |
| CAZyme | HRGMv2_4232_50 | HRGMv2_4232_50_6 | 4680 | 6110 | - | GH32 |
| STP | HRGMv2_4232_50 | HRGMv2_4232_50_7 | 6135 | 7103 | - | PfkB |
| TC | HRGMv2_4232_50 | HRGMv2_4232_50_8 | 7192 | 8565 | - | 4.A.1.2.9 |
Gene ID: HRGMv2_4232_50_2
Type: TC
Location: 1363 - 2469 (+)
Type: TC
Location: 1363 - 2469 (+)
Gene ID: HRGMv2_4232_50_3
Type: TC
Location: 2507 - 3070 (-)
Type: TC
Location: 2507 - 3070 (-)
Gene ID: HRGMv2_4232_50_4
Type: pfam
Location: 3067 - 3642 (-)
Type: pfam
Location: 3067 - 3642 (-)
Gene ID: HRGMv2_4232_50_5
Type: TF
Location: 3775 - 4644 (+)
Type: TF
Location: 3775 - 4644 (+)
Gene ID: HRGMv2_4232_50_6
Type: CAZyme
Location: 4680 - 6110 (-)
Type: CAZyme
Location: 4680 - 6110 (-)
Gene ID: HRGMv2_4232_50_7
Type: STP
Location: 6135 - 7103 (-)
Type: STP
Location: 6135 - 7103 (-)
Gene ID: HRGMv2_4232_50_8
Type: TC
Location: 7192 - 8565 (-)
Type: TC
Location: 7192 - 8565 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
MOL361
Family
Turicibacteraceae
Genus
Turicibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.