Cluster: HRGMv2_4232_CGC4
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4232
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4232_2 | HRGMv2_4232_2_22 | 19625 | 21502 | + | 4.A.1.2.11 |
| CAZyme | HRGMv2_4232_2 | HRGMv2_4232_2_23 | 21536 | 22951 | + | GH1 |
| pfam | HRGMv2_4232_2 | HRGMv2_4232_2_24 | 23140 | 23754 | - | Mntp |
| pfam | HRGMv2_4232_2 | HRGMv2_4232_2_25 | 23881 | 24477 | + | HD | YfbR-like | HD_3 |
| TC | HRGMv2_4232_2 | HRGMv2_4232_2_26 | 24491 | 24946 | - | 2.A.79.1.7 |
| TC | HRGMv2_4232_2 | HRGMv2_4232_2_27 | 24956 | 25711 | - | 2.A.79.1.4 |
| TF | HRGMv2_4232_2 | HRGMv2_4232_2_28 | 25868 | 26332 | + | MarR |
| TC | HRGMv2_4232_2 | HRGMv2_4232_2_29 | 26334 | 27704 | + | 2.A.66.1.32 |
Gene ID: HRGMv2_4232_2_22
Type: TC
Location: 19625 - 21502 (+)
Type: TC
Location: 19625 - 21502 (+)
Gene ID: HRGMv2_4232_2_23
Type: CAZyme
Location: 21536 - 22951 (+)
Type: CAZyme
Location: 21536 - 22951 (+)
Gene ID: HRGMv2_4232_2_24
Type: pfam
Location: 23140 - 23754 (-)
Type: pfam
Location: 23140 - 23754 (-)
Gene ID: HRGMv2_4232_2_25
Type: pfam
Location: 23881 - 24477 (+)
Type: pfam
Location: 23881 - 24477 (+)
Gene ID: HRGMv2_4232_2_26
Type: TC
Location: 24491 - 24946 (-)
Type: TC
Location: 24491 - 24946 (-)
Gene ID: HRGMv2_4232_2_27
Type: TC
Location: 24956 - 25711 (-)
Type: TC
Location: 24956 - 25711 (-)
Gene ID: HRGMv2_4232_2_28
Type: TF
Location: 25868 - 26332 (+)
Type: TF
Location: 25868 - 26332 (+)
Gene ID: HRGMv2_4232_2_29
Type: TC
Location: 26334 - 27704 (+)
Type: TC
Location: 26334 - 27704 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
MOL361
Family
Turicibacteraceae
Genus
Turicibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.