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Cluster: HRGMv2_4232_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4232_6 HRGMv2_4232_6_45 47791 49176 + 2.A.66.1.22
CAZyme HRGMv2_4232_6 HRGMv2_4232_6_46 49997 50983 + GT113
TC HRGMv2_4232_6 HRGMv2_4232_6_47 51122 52138 + 9.B.18.2.1
pfam HRGMv2_4232_6 HRGMv2_4232_6_48 52175 53284 + Epimerase | Polysacc_synt_2 | Polysacc_synt_C
STP HRGMv2_4232_6 HRGMv2_4232_6_49 53363 54163 + TPR_1
CAZyme HRGMv2_4232_6 HRGMv2_4232_6_50 54153 55133 + GT2
CAZyme HRGMv2_4232_6 HRGMv2_4232_6_51 55120 55848 + GT2
CAZyme HRGMv2_4232_6 HRGMv2_4232_6_52 55842 56693 + GT32
CAZyme HRGMv2_4232_6 HRGMv2_4232_6_53 57800 58882 - GT2
CAZyme HRGMv2_4232_6 HRGMv2_4232_6_54 59207 61342 - CBM68 | GH13_14
Gene ID: HRGMv2_4232_6_45
Type: TC
Location: 47791 - 49176 (+)
Gene ID: HRGMv2_4232_6_46
Type: CAZyme
Location: 49997 - 50983 (+)
Gene ID: HRGMv2_4232_6_47
Type: TC
Location: 51122 - 52138 (+)
Gene ID: HRGMv2_4232_6_48
Type: pfam
Location: 52175 - 53284 (+)
Gene ID: HRGMv2_4232_6_49
Type: STP
Location: 53363 - 54163 (+)
Gene ID: HRGMv2_4232_6_50
Type: CAZyme
Location: 54153 - 55133 (+)
Gene ID: HRGMv2_4232_6_51
Type: CAZyme
Location: 55120 - 55848 (+)
Gene ID: HRGMv2_4232_6_52
Type: CAZyme
Location: 55842 - 56693 (+)
Gene ID: HRGMv2_4232_6_53
Type: CAZyme
Location: 57800 - 58882 (-)
Gene ID: HRGMv2_4232_6_54
Type: CAZyme
Location: 59207 - 61342 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
MOL361
→
Family
Turicibacteraceae
→
Genus
Turicibacter
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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