Cluster: HRGMv2_4232_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4232
- CGC Family ID: CGCFAM_00041
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4232_6 | HRGMv2_4232_6_30 | 31827 | 33173 | + | 3.A.1.1.11 |
| TC | HRGMv2_4232_6 | HRGMv2_4232_6_31 | 33177 | 34103 | + | 3.A.1.1.11 |
| TC | HRGMv2_4232_6 | HRGMv2_4232_6_32 | 34118 | 34975 | + | 3.A.1.1.11 |
| CAZyme | HRGMv2_4232_6 | HRGMv2_4232_6_33 | 35093 | 36202 | + | GH105 |
| CAZyme | HRGMv2_4232_6 | HRGMv2_4232_6_34 | 36192 | 37772 | + | GH28 |
Gene ID: HRGMv2_4232_6_30
Type: TC
Location: 31827 - 33173 (+)
Type: TC
Location: 31827 - 33173 (+)
Gene ID: HRGMv2_4232_6_31
Type: TC
Location: 33177 - 34103 (+)
Type: TC
Location: 33177 - 34103 (+)
Gene ID: HRGMv2_4232_6_32
Type: TC
Location: 34118 - 34975 (+)
Type: TC
Location: 34118 - 34975 (+)
Gene ID: HRGMv2_4232_6_33
Type: CAZyme
Location: 35093 - 36202 (+)
Type: CAZyme
Location: 35093 - 36202 (+)
Gene ID: HRGMv2_4232_6_34
Type: CAZyme
Location: 36192 - 37772 (+)
Type: CAZyme
Location: 36192 - 37772 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
MOL361
Family
Turicibacteraceae
Genus
Turicibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.