Cluster: HRGMv2_4229_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4229
- CGC Family ID: CGCFAM_00340
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4229_64 | HRGMv2_4229_64_3 | 1545 | 2417 | + | 9.B.34.1.4 |
| pfam | HRGMv2_4229_64 | HRGMv2_4229_64_4 | 2536 | 3351 | + | LpxI_C | LpxI_N |
| CAZyme | HRGMv2_4229_64 | HRGMv2_4229_64_5 | 3355 | 4479 | + | GT19 |
| TC | HRGMv2_4229_64 | HRGMv2_4229_64_6 | 4660 | 5811 | + | 2.A.1.2.14 |
Gene ID: HRGMv2_4229_64_3
Type: TC
Location: 1545 - 2417 (+)
Type: TC
Location: 1545 - 2417 (+)
Gene ID: HRGMv2_4229_64_4
Type: pfam
Location: 2536 - 3351 (+)
Type: pfam
Location: 2536 - 3351 (+)
Gene ID: HRGMv2_4229_64_5
Type: CAZyme
Location: 3355 - 4479 (+)
Type: CAZyme
Location: 3355 - 4479 (+)
Gene ID: HRGMv2_4229_64_6
Type: TC
Location: 4660 - 5811 (+)
Type: TC
Location: 4660 - 5811 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
CAG-196
Species
CAG-196 sp934757275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.