Cluster: HRGMv2_4228_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4228
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4228_6 | HRGMv2_4228_6_42 | 35565 | 36542 | + | GH3 |
| STP | HRGMv2_4228_6 | HRGMv2_4228_6_43 | 36609 | 37850 | + | Aminotran_1_2 |
| TC | HRGMv2_4228_6 | HRGMv2_4228_6_44 | 37940 | 38902 | + | 9.B.146.1.4 |
Gene ID: HRGMv2_4228_6_42
Type: CAZyme
Location: 35565 - 36542 (+)
Type: CAZyme
Location: 35565 - 36542 (+)
Gene ID: HRGMv2_4228_6_43
Type: STP
Location: 36609 - 37850 (+)
Type: STP
Location: 36609 - 37850 (+)
Gene ID: HRGMv2_4228_6_44
Type: TC
Location: 37940 - 38902 (+)
Type: TC
Location: 37940 - 38902 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Zag111
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4228_6_43 | vegan > omnivore | 2.21132 | 0.02973 |
| HRGMv2_4228_6_43 | vegetarian > omnivore | 1.78477 | 0.01332 |
| HRGMv2_4228_6_44 | vegan > omnivore | 19.19893 | 0.02973 |
| HRGMv2_4228_6_44 | vegetarian > omnivore | 21.04582 | 0.01332 |
| HRGMv2_4228_6_44 | vegetarian > vegan | 1.84690 | 0.04105 |