Cluster: HRGMv2_4223_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4223
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4223_45 | HRGMv2_4223_45_5 | 5088 | 6194 | - | GT28 |
| TC | HRGMv2_4223_45 | HRGMv2_4223_45_6 | 6178 | 7332 | - | 2.A.103.1.3 |
| pfam | HRGMv2_4223_45 | HRGMv2_4223_45_7 | 7316 | 8644 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_4223_45 | HRGMv2_4223_45_8 | 8657 | 9598 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_4223_45_5
Type: CAZyme
Location: 5088 - 6194 (-)
Type: CAZyme
Location: 5088 - 6194 (-)
Gene ID: HRGMv2_4223_45_6
Type: TC
Location: 6178 - 7332 (-)
Type: TC
Location: 6178 - 7332 (-)
Gene ID: HRGMv2_4223_45_7
Type: pfam
Location: 7316 - 8644 (-)
Type: pfam
Location: 7316 - 8644 (-)
Gene ID: HRGMv2_4223_45_8
Type: TC
Location: 8657 - 9598 (-)
Type: TC
Location: 8657 - 9598 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
CAG-196
Species
CAG-196 sp934757155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.