Cluster: HRGMv2_4223_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4223
- CGC Family ID: CGCFAM_06082
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4223_23 | HRGMv2_4223_23_2 | 493 | 1587 | + | 8.A.1.1.2 |
| TC | HRGMv2_4223_23 | HRGMv2_4223_23_3 | 1590 | 3125 | + | 2.A.1.3.36 |
| NULL(UNKNOWN) | HRGMv2_4223_23 | HRGMv2_4223_23_4 | 3232 | 3405 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4223_23 | HRGMv2_4223_23_5 | 3461 | 5254 | - | GH13_3 |
Gene ID: HRGMv2_4223_23_2
Type: TC
Location: 493 - 1587 (+)
Type: TC
Location: 493 - 1587 (+)
Gene ID: HRGMv2_4223_23_3
Type: TC
Location: 1590 - 3125 (+)
Type: TC
Location: 1590 - 3125 (+)
Gene ID: HRGMv2_4223_23_4
Type:
Location: 3232 - 3405 (+)
Type:
Location: 3232 - 3405 (+)
Gene ID: HRGMv2_4223_23_5
Type: CAZyme
Location: 3461 - 5254 (-)
Type: CAZyme
Location: 3461 - 5254 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
CAG-196
Species
CAG-196 sp934757155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.