Cluster: HRGMv2_4222_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4222
- CGC Family ID: CGCFAM_00003
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4222_28 | HRGMv2_4222_28_1 | 2 | 1591 | + | GT111 |
| pfam | HRGMv2_4222_28 | HRGMv2_4222_28_2 | 1581 | 2636 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| TC | HRGMv2_4222_28 | HRGMv2_4222_28_3 | 2639 | 4432 | + | 3.A.1.106.2 |
| STP | HRGMv2_4222_28 | HRGMv2_4222_28_4 | 4520 | 5572 | + | PALP |
| TC | HRGMv2_4222_28 | HRGMv2_4222_28_5 | 5630 | 6112 | - | 1.A.22.1.1 |
Gene ID: HRGMv2_4222_28_1
Type: CAZyme
Location: 2 - 1591 (+)
Type: CAZyme
Location: 2 - 1591 (+)
Gene ID: HRGMv2_4222_28_2
Type: pfam
Location: 1581 - 2636 (+)
Type: pfam
Location: 1581 - 2636 (+)
Gene ID: HRGMv2_4222_28_3
Type: TC
Location: 2639 - 4432 (+)
Type: TC
Location: 2639 - 4432 (+)
Gene ID: HRGMv2_4222_28_4
Type: STP
Location: 4520 - 5572 (+)
Type: STP
Location: 4520 - 5572 (+)
Gene ID: HRGMv2_4222_28_5
Type: TC
Location: 5630 - 6112 (-)
Type: TC
Location: 5630 - 6112 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Zag111
Species
Zag111 sp944324845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.