Cluster: HRGMv2_4222_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4222
- CGC Family ID: CGCFAM_03799
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4222_16 | HRGMv2_4222_16_6 | 9785 | 11509 | - | GH57 |
| NULL(UNKNOWN) | HRGMv2_4222_16 | HRGMv2_4222_16_7 | 11687 | 12211 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4222_16 | HRGMv2_4222_16_8 | 12247 | 12957 | - | GH23 |
| pfam | HRGMv2_4222_16 | HRGMv2_4222_16_9 | 13204 | 15531 | - | Lactamase_B | Competence | DUF4131 |
| TC | HRGMv2_4222_16 | HRGMv2_4222_16_10 | 15693 | 16805 | + | 3.A.15.2.1 |
Gene ID: HRGMv2_4222_16_6
Type: CAZyme
Location: 9785 - 11509 (-)
Type: CAZyme
Location: 9785 - 11509 (-)
Gene ID: HRGMv2_4222_16_7
Type:
Location: 11687 - 12211 (+)
Type:
Location: 11687 - 12211 (+)
Gene ID: HRGMv2_4222_16_8
Type: CAZyme
Location: 12247 - 12957 (-)
Type: CAZyme
Location: 12247 - 12957 (-)
Gene ID: HRGMv2_4222_16_9
Type: pfam
Location: 13204 - 15531 (-)
Type: pfam
Location: 13204 - 15531 (-)
Gene ID: HRGMv2_4222_16_10
Type: TC
Location: 15693 - 16805 (+)
Type: TC
Location: 15693 - 16805 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Zag111
Species
Zag111 sp944324845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.