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Cluster: HRGMv2_4222_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4222_8 HRGMv2_4222_8_1 3 638 - GT35
NULL(UNKNOWN) HRGMv2_4222_8 HRGMv2_4222_8_2 773 982 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_4222_8 HRGMv2_4222_8_3 1059 2309 - Aminotran_1_2
TC HRGMv2_4222_8 HRGMv2_4222_8_4 2394 3917 - 1.B.17.2.5
TC HRGMv2_4222_8 HRGMv2_4222_8_5 3917 7180 - 2.A.6.2.22
TC HRGMv2_4222_8 HRGMv2_4222_8_6 7180 8340 - 2.A.6.2.45
Gene ID: HRGMv2_4222_8_1
Type: CAZyme
Location: 3 - 638 (-)
Gene ID: HRGMv2_4222_8_2
Type:
Location: 773 - 982 (-)
Gene ID: HRGMv2_4222_8_3
Type: STP
Location: 1059 - 2309 (-)
Gene ID: HRGMv2_4222_8_4
Type: TC
Location: 2394 - 3917 (-)
Gene ID: HRGMv2_4222_8_5
Type: TC
Location: 3917 - 7180 (-)
Gene ID: HRGMv2_4222_8_6
Type: TC
Location: 7180 - 8340 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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