Cluster: HRGMv2_4221_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4221
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4221_17 | HRGMv2_4221_17_23 | 18261 | 19016 | + | GT26 |
| pfam | HRGMv2_4221_17 | HRGMv2_4221_17_24 | 19016 | 19861 | + | Transketolase_N | E1_dh | TPP_enzyme_C | DXP_synthase_N |
| pfam | HRGMv2_4221_17 | HRGMv2_4221_17_25 | 19869 | 20828 | + | Transket_pyr | Transketolase_C |
| TC | HRGMv2_4221_17 | HRGMv2_4221_17_26 | 20883 | 21557 | + | 3.A.1.140.1 |
Gene ID: HRGMv2_4221_17_23
Type: CAZyme
Location: 18261 - 19016 (+)
Type: CAZyme
Location: 18261 - 19016 (+)
Gene ID: HRGMv2_4221_17_24
Type: pfam
Location: 19016 - 19861 (+)
Type: pfam
Location: 19016 - 19861 (+)
Gene ID: HRGMv2_4221_17_25
Type: pfam
Location: 19869 - 20828 (+)
Type: pfam
Location: 19869 - 20828 (+)
Gene ID: HRGMv2_4221_17_26
Type: TC
Location: 20883 - 21557 (+)
Type: TC
Location: 20883 - 21557 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
UMGS1477
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.