Cluster: HRGMv2_4221_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4221
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4221_1 | HRGMv2_4221_1_27 | 28342 | 29439 | - | GT28 |
| TC | HRGMv2_4221_1 | HRGMv2_4221_1_28 | 29459 | 30610 | - | 2.A.103.1.3 |
| pfam | HRGMv2_4221_1 | HRGMv2_4221_1_29 | 30588 | 31937 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_4221_1 | HRGMv2_4221_1_30 | 31964 | 32926 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_4221_1_27
Type: CAZyme
Location: 28342 - 29439 (-)
Type: CAZyme
Location: 28342 - 29439 (-)
Gene ID: HRGMv2_4221_1_28
Type: TC
Location: 29459 - 30610 (-)
Type: TC
Location: 29459 - 30610 (-)
Gene ID: HRGMv2_4221_1_29
Type: pfam
Location: 30588 - 31937 (-)
Type: pfam
Location: 30588 - 31937 (-)
Gene ID: HRGMv2_4221_1_30
Type: TC
Location: 31964 - 32926 (-)
Type: TC
Location: 31964 - 32926 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
UMGS1477
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.