Cluster: HRGMv2_4220_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4220
- CGC Family ID: CGCFAM_09919
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4220_13 | HRGMv2_4220_13_11 | 9678 | 10205 | - | 2.A.51.1.6 |
| TC | HRGMv2_4220_13 | HRGMv2_4220_13_12 | 10202 | 10756 | - | 2.A.51.1.6 |
| TF | HRGMv2_4220_13 | HRGMv2_4220_13_13 | 10812 | 11135 | - | HTH_3 |
| pfam | HRGMv2_4220_13 | HRGMv2_4220_13_14 | 11265 | 11972 | + | N_methyl |
| TC | HRGMv2_4220_13 | HRGMv2_4220_13_15 | 11975 | 12367 | - | 3.A.2.1.5 |
| TC | HRGMv2_4220_13 | HRGMv2_4220_13_16 | 12445 | 13848 | - | 3.A.2.1.2 |
| CAZyme | HRGMv2_4220_13 | HRGMv2_4220_13_17 | 13944 | 14936 | + | GT9 |
Gene ID: HRGMv2_4220_13_11
Type: TC
Location: 9678 - 10205 (-)
Type: TC
Location: 9678 - 10205 (-)
Gene ID: HRGMv2_4220_13_12
Type: TC
Location: 10202 - 10756 (-)
Type: TC
Location: 10202 - 10756 (-)
Gene ID: HRGMv2_4220_13_13
Type: TF
Location: 10812 - 11135 (-)
Type: TF
Location: 10812 - 11135 (-)
Gene ID: HRGMv2_4220_13_14
Type: pfam
Location: 11265 - 11972 (+)
Type: pfam
Location: 11265 - 11972 (+)
Gene ID: HRGMv2_4220_13_15
Type: TC
Location: 11975 - 12367 (-)
Type: TC
Location: 11975 - 12367 (-)
Gene ID: HRGMv2_4220_13_16
Type: TC
Location: 12445 - 13848 (-)
Type: TC
Location: 12445 - 13848 (-)
Gene ID: HRGMv2_4220_13_17
Type: CAZyme
Location: 13944 - 14936 (+)
Type: CAZyme
Location: 13944 - 14936 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Scatousia
Species
Scatousia sp944325865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.