Cluster: HRGMv2_4220_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4220
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4220_9 | HRGMv2_4220_9_26 | 27620 | 29152 | + | 2.A.53.3.12 |
| pfam | HRGMv2_4220_9 | HRGMv2_4220_9_27 | 29194 | 29823 | + | YkuD |
| NULL(UNKNOWN) | HRGMv2_4220_9 | HRGMv2_4220_9_28 | 29825 | 30145 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4220_9 | HRGMv2_4220_9_29 | 30215 | 31120 | + | GT2 |
| CAZyme | HRGMv2_4220_9 | HRGMv2_4220_9_30 | 31117 | 32049 | - | GT8 |
Gene ID: HRGMv2_4220_9_26
Type: TC
Location: 27620 - 29152 (+)
Type: TC
Location: 27620 - 29152 (+)
Gene ID: HRGMv2_4220_9_27
Type: pfam
Location: 29194 - 29823 (+)
Type: pfam
Location: 29194 - 29823 (+)
Gene ID: HRGMv2_4220_9_28
Type:
Location: 29825 - 30145 (-)
Type:
Location: 29825 - 30145 (-)
Gene ID: HRGMv2_4220_9_29
Type: CAZyme
Location: 30215 - 31120 (+)
Type: CAZyme
Location: 30215 - 31120 (+)
Gene ID: HRGMv2_4220_9_30
Type: CAZyme
Location: 31117 - 32049 (-)
Type: CAZyme
Location: 31117 - 32049 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Scatousia
Species
Scatousia sp944325865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.