dbCAN HGM

Cluster: HRGMv2_4219_CGC1

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_4219_1	HRGMv2_4219_1_183	133249	134973	-	GH57
TF	HRGMv2_4219_1	HRGMv2_4219_1_184	135144	135464	-	HTH_3
CAZyme	HRGMv2_4219_1	HRGMv2_4219_1_185	135629	136660	+	GT2
CAZyme	HRGMv2_4219_1	HRGMv2_4219_1_186	136663	137517	+	GT2
CAZyme	HRGMv2_4219_1	HRGMv2_4219_1_187	137556	138203	-	GH23
pfam	HRGMv2_4219_1	HRGMv2_4219_1_188	138453	140846	-	Lactamase_B \| Competence \| DUF4131
TC	HRGMv2_4219_1	HRGMv2_4219_1_189	140932	142032	+	3.A.15.2.1
pfam	HRGMv2_4219_1	HRGMv2_4219_1_190	142032	142805	+	RecO_C \| RecO_N
peptidase	HRGMv2_4219_1	HRGMv2_4219_1_191	142877	145462	+	M16.UPB
TC	HRGMv2_4219_1	HRGMv2_4219_1_192	145507	146331	-	3.A.1.1.11

Gene ID: HRGMv2_4219_1_183
Type: CAZyme
Location: 133249 - 134973 (-)

Gene ID: HRGMv2_4219_1_184
Type: TF
Location: 135144 - 135464 (-)

Gene ID: HRGMv2_4219_1_185
Type: CAZyme
Location: 135629 - 136660 (+)

Gene ID: HRGMv2_4219_1_186
Type: CAZyme
Location: 136663 - 137517 (+)

Gene ID: HRGMv2_4219_1_187
Type: CAZyme
Location: 137556 - 138203 (-)

Gene ID: HRGMv2_4219_1_188
Type: pfam
Location: 138453 - 140846 (-)

Gene ID: HRGMv2_4219_1_189
Type: TC
Location: 140932 - 142032 (+)

Gene ID: HRGMv2_4219_1_190
Type: pfam
Location: 142032 - 142805 (+)

Gene ID: HRGMv2_4219_1_191
Type: peptidase
Location: 142877 - 145462 (+)

Gene ID: HRGMv2_4219_1_192
Type: TC
Location: 145507 - 146331 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_4219_1_183	vegetarian > omnivore	1.70727	0.02973
HRGMv2_4219_1_189	vegetarian > omnivore	20.95702	0.02973