Cluster: HRGMv2_4217_CGC8
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_4217
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4217_7 | HRGMv2_4217_7_9 | 6536 | 8602 | - | GH13_39 |
| CAZyme | HRGMv2_4217_7 | HRGMv2_4217_7_10 | 8639 | 11071 | - | GT35 |
| CAZyme | HRGMv2_4217_7 | HRGMv2_4217_7_11 | 11092 | 12522 | - | GT5 |
| pfam | HRGMv2_4217_7 | HRGMv2_4217_7_12 | 12547 | 13662 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_4217_7 | HRGMv2_4217_7_13 | 13683 | 14822 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_4217_7 | HRGMv2_4217_7_14 | 14874 | 16847 | - | GH13_9 |
| pfam | HRGMv2_4217_7 | HRGMv2_4217_7_15 | 16911 | 17366 | - | 2-thiour_desulf |
| pfam | HRGMv2_4217_7 | HRGMv2_4217_7_16 | 17400 | 18281 | - | PseudoU_synth_2 |
| CAZyme | HRGMv2_4217_7 | HRGMv2_4217_7_17 | 18575 | 19738 | - | CE9 |
| pfam | HRGMv2_4217_7 | HRGMv2_4217_7_18 | 19865 | 20407 | - | MatE |
| TC | HRGMv2_4217_7 | HRGMv2_4217_7_19 | 20407 | 21210 | - | 2.A.66.1.33 |
| pfam | HRGMv2_4217_7 | HRGMv2_4217_7_20 | 21499 | 21891 | + | Bac_DNA_binding |
| TC | HRGMv2_4217_7 | HRGMv2_4217_7_21 | 22029 | 23411 | + | 2.A.66.1.32 |
Gene ID: HRGMv2_4217_7_9
Type: CAZyme
Location: 6536 - 8602 (-)
Type: CAZyme
Location: 6536 - 8602 (-)
Gene ID: HRGMv2_4217_7_10
Type: CAZyme
Location: 8639 - 11071 (-)
Type: CAZyme
Location: 8639 - 11071 (-)
Gene ID: HRGMv2_4217_7_11
Type: CAZyme
Location: 11092 - 12522 (-)
Type: CAZyme
Location: 11092 - 12522 (-)
Gene ID: HRGMv2_4217_7_12
Type: pfam
Location: 12547 - 13662 (-)
Type: pfam
Location: 12547 - 13662 (-)
Gene ID: HRGMv2_4217_7_13
Type: pfam
Location: 13683 - 14822 (-)
Type: pfam
Location: 13683 - 14822 (-)
Gene ID: HRGMv2_4217_7_14
Type: CAZyme
Location: 14874 - 16847 (-)
Type: CAZyme
Location: 14874 - 16847 (-)
Gene ID: HRGMv2_4217_7_15
Type: pfam
Location: 16911 - 17366 (-)
Type: pfam
Location: 16911 - 17366 (-)
Gene ID: HRGMv2_4217_7_16
Type: pfam
Location: 17400 - 18281 (-)
Type: pfam
Location: 17400 - 18281 (-)
Gene ID: HRGMv2_4217_7_17
Type: CAZyme
Location: 18575 - 19738 (-)
Type: CAZyme
Location: 18575 - 19738 (-)
Gene ID: HRGMv2_4217_7_18
Type: pfam
Location: 19865 - 20407 (-)
Type: pfam
Location: 19865 - 20407 (-)
Gene ID: HRGMv2_4217_7_19
Type: TC
Location: 20407 - 21210 (-)
Type: TC
Location: 20407 - 21210 (-)
Gene ID: HRGMv2_4217_7_20
Type: pfam
Location: 21499 - 21891 (+)
Type: pfam
Location: 21499 - 21891 (+)
Gene ID: HRGMv2_4217_7_21
Type: TC
Location: 22029 - 23411 (+)
Type: TC
Location: 22029 - 23411 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_B
Species
Fusobacterium_B sp019416865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.