Cluster: HRGMv2_4217_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4217
- CGC Family ID: CGCFAM_10563
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4217_5 | HRGMv2_4217_5_20 | 17830 | 19167 | + | 2.A.25.1.3 |
| TF | HRGMv2_4217_5 | HRGMv2_4217_5_21 | 19191 | 19961 | + | HTH_DeoR |
| TC | HRGMv2_4217_5 | HRGMv2_4217_5_22 | 20195 | 21469 | + | 2.A.1.52.1 |
| pfam | HRGMv2_4217_5 | HRGMv2_4217_5_23 | 21495 | 22538 | + | AP_endonuc_2 |
| pfam | HRGMv2_4217_5 | HRGMv2_4217_5_24 | 22568 | 23434 | + | YitT_membrane | DUF2179 |
| CAZyme | HRGMv2_4217_5 | HRGMv2_4217_5_25 | 23610 | 24632 | + | GT9 |
Gene ID: HRGMv2_4217_5_20
Type: TC
Location: 17830 - 19167 (+)
Type: TC
Location: 17830 - 19167 (+)
Gene ID: HRGMv2_4217_5_21
Type: TF
Location: 19191 - 19961 (+)
Type: TF
Location: 19191 - 19961 (+)
Gene ID: HRGMv2_4217_5_22
Type: TC
Location: 20195 - 21469 (+)
Type: TC
Location: 20195 - 21469 (+)
Gene ID: HRGMv2_4217_5_23
Type: pfam
Location: 21495 - 22538 (+)
Type: pfam
Location: 21495 - 22538 (+)
Gene ID: HRGMv2_4217_5_24
Type: pfam
Location: 22568 - 23434 (+)
Type: pfam
Location: 22568 - 23434 (+)
Gene ID: HRGMv2_4217_5_25
Type: CAZyme
Location: 23610 - 24632 (+)
Type: CAZyme
Location: 23610 - 24632 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_B
Species
Fusobacterium_B sp019416865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.