Cluster: HRGMv2_4217_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4217
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4217_4 | HRGMv2_4217_4_2 | 4376 | 5989 | - | 3.A.1.121.4 |
| NULL(UNKNOWN) | HRGMv2_4217_4 | HRGMv2_4217_4_3 | 6124 | 6432 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4217_4 | HRGMv2_4217_4_4 | 6445 | 7413 | + | Oxidored_FMN | Oxidored_FMN |
| CAZyme | HRGMv2_4217_4 | HRGMv2_4217_4_5 | 7400 | 8569 | + | GT104 |
Gene ID: HRGMv2_4217_4_2
Type: TC
Location: 4376 - 5989 (-)
Type: TC
Location: 4376 - 5989 (-)
Gene ID: HRGMv2_4217_4_3
Type:
Location: 6124 - 6432 (+)
Type:
Location: 6124 - 6432 (+)
Gene ID: HRGMv2_4217_4_4
Type: pfam
Location: 6445 - 7413 (+)
Type: pfam
Location: 6445 - 7413 (+)
Gene ID: HRGMv2_4217_4_5
Type: CAZyme
Location: 7400 - 8569 (+)
Type: CAZyme
Location: 7400 - 8569 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_B
Species
Fusobacterium_B sp019416865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.