Cluster: HRGMv2_4217_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4217
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4217_45 | HRGMv2_4217_45_1 | 63 | 1436 | - | 2.A.25.1.5 |
| TC | HRGMv2_4217_45 | HRGMv2_4217_45_2 | 1713 | 3857 | + | 9.B.18.2.1 |
| STP | HRGMv2_4217_45 | HRGMv2_4217_45_3 | 3886 | 5139 | + | Aminotran_1_2 |
| TC | HRGMv2_4217_45 | HRGMv2_4217_45_4 | 5142 | 5768 | + | 9.B.18.1.1 |
| pfam | HRGMv2_4217_45 | HRGMv2_4217_45_5 | 5768 | 6745 | + | FemAB_like | Acetyltransf_6 |
| CAZyme | HRGMv2_4217_45 | HRGMv2_4217_45_6 | 6738 | 7994 | + | GT4 |
Gene ID: HRGMv2_4217_45_1
Type: TC
Location: 63 - 1436 (-)
Type: TC
Location: 63 - 1436 (-)
Gene ID: HRGMv2_4217_45_2
Type: TC
Location: 1713 - 3857 (+)
Type: TC
Location: 1713 - 3857 (+)
Gene ID: HRGMv2_4217_45_3
Type: STP
Location: 3886 - 5139 (+)
Type: STP
Location: 3886 - 5139 (+)
Gene ID: HRGMv2_4217_45_4
Type: TC
Location: 5142 - 5768 (+)
Type: TC
Location: 5142 - 5768 (+)
Gene ID: HRGMv2_4217_45_5
Type: pfam
Location: 5768 - 6745 (+)
Type: pfam
Location: 5768 - 6745 (+)
Gene ID: HRGMv2_4217_45_6
Type: CAZyme
Location: 6738 - 7994 (+)
Type: CAZyme
Location: 6738 - 7994 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_B
Species
Fusobacterium_B sp019416865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.