Cluster: HRGMv2_4217_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4217
- CGC Family ID: CGCFAM_00049
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4217_42 | HRGMv2_4217_42_12 | 8553 | 9650 | - | GT4 |
| pfam | HRGMv2_4217_42 | HRGMv2_4217_42_13 | 9663 | 10307 | - | PglD_N |
| pfam | HRGMv2_4217_42 | HRGMv2_4217_42_14 | 10358 | 11032 | - | PglD_N |
| TC | HRGMv2_4217_42 | HRGMv2_4217_42_15 | 11029 | 11637 | - | 9.B.18.1.3 |
| STP | HRGMv2_4217_42 | HRGMv2_4217_42_16 | 11640 | 12893 | - | Aminotran_1_2 |
| TC | HRGMv2_4217_42 | HRGMv2_4217_42_17 | 12922 | 14145 | - | 9.B.18.2.1 |
Gene ID: HRGMv2_4217_42_12
Type: CAZyme
Location: 8553 - 9650 (-)
Type: CAZyme
Location: 8553 - 9650 (-)
Gene ID: HRGMv2_4217_42_13
Type: pfam
Location: 9663 - 10307 (-)
Type: pfam
Location: 9663 - 10307 (-)
Gene ID: HRGMv2_4217_42_14
Type: pfam
Location: 10358 - 11032 (-)
Type: pfam
Location: 10358 - 11032 (-)
Gene ID: HRGMv2_4217_42_15
Type: TC
Location: 11029 - 11637 (-)
Type: TC
Location: 11029 - 11637 (-)
Gene ID: HRGMv2_4217_42_16
Type: STP
Location: 11640 - 12893 (-)
Type: STP
Location: 11640 - 12893 (-)
Gene ID: HRGMv2_4217_42_17
Type: TC
Location: 12922 - 14145 (-)
Type: TC
Location: 12922 - 14145 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_B
Species
Fusobacterium_B sp019416865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.